Clone: 02182476214419926 A06
Tagged gene: CG9628
Identifier: FBgn0036433
Clone | FlyFos015816(pRedFlp-Hgr)(CG9628[29544]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
---|---|
Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | good | [view] |
Genes in pFlyFos vector
Gene | Clone relative | Genome relative | |||||
---|---|---|---|---|---|---|---|
Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
---|---|---|---|---|---|---|---|---|
pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-3L | ||||||||
14621260 | 14625173 | 25262 | 29175 | + | gene | RecQ5 | coding_transcript | |
14615910 | 14621274 | 29161 | 35587 | - | gene | CG9628 | coding_transcript | |
14615910 | 14621274 | 29161 | 35587 | - | mrna | FBtr0075677 | coding_transcript | |
14615912 | 14621274 | 29161 | 35585 | - | mrna | FBtr0075678 | coding_transcript | |
14620656 | 14621274 | 29161 | 30841 | - | exon | coding_transcript | ||
14620656 | 14621274 | 29161 | 30841 | - | exon | coding_transcript | ||
14620894 | 14621274 | 29161 | 29541 | - | three_prime_utr | coding_transcript | ||
14620894 | 14621274 | 29161 | 29541 | - | three_prime_utr | coding_transcript | ||
14615912 | 14621083 | 29352 | 35585 | - | mrna | FBtr0301239 | coding_transcript | |
14620656 | 14621083 | 29352 | 30841 | - | exon | coding_transcript | ||
14620894 | 14621083 | 29352 | 29541 | - | three_prime_utr | coding_transcript | ||
14620656 | 14620893 | 29542 | 30841 | - | cds | coding_transcript | ||
14620656 | 14620893 | 29542 | 30841 | - | cds | coding_transcript | ||
14620656 | 14620893 | 29542 | 30841 | - | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
2437 | 2470 | 29618 | 29651 | - | misc_recomb | FRT | CLC | |
2358 | 2429 | 29659 | 29730 | - | cds | BLRP | CLC | |
2337 | 2357 | 29731 | 29751 | - | cds | TEV | CLC | |
2313 | 2336 | 29752 | 29775 | - | cds | Precision cut site | CLC | |
2271 | 2312 | 29776 | 29817 | - | cds | V5 | CLC | |
1548 | 2264 | 29824 | 30540 | - | cds | SGFP | CLC | |
1482 | 1541 | 30547 | 30606 | - | cds | 2xTY1 | CLC | |
dmel-5.43-3L | ||||||||
14620596 | 14620655 | 30842 | 30901 | - | intron | coding_transcript | ||
14620596 | 14620655 | 30842 | 30901 | - | intron | coding_transcript | ||
14620596 | 14620655 | 30842 | 30901 | - | intron | coding_transcript | ||
14620435 | 14620595 | 30902 | 31062 | - | exon | coding_transcript | ||
14620435 | 14620595 | 30902 | 31062 | - | cds | coding_transcript | ||
14620435 | 14620595 | 30902 | 31062 | - | exon | coding_transcript | ||
14620435 | 14620595 | 30902 | 31062 | - | cds | coding_transcript | ||
14620435 | 14620595 | 30902 | 31062 | - | exon | coding_transcript | ||
14620435 | 14620595 | 30902 | 31062 | - | cds | coding_transcript | ||
14620227 | 14620434 | 31063 | 31270 | - | intron | coding_transcript | ||
14620227 | 14620434 | 31063 | 31270 | - | intron | coding_transcript | ||
14620227 | 14620434 | 31063 | 31270 | - | intron | coding_transcript | ||
14620120 | 14620226 | 31271 | 31377 | - | exon | coding_transcript | ||
14620120 | 14620226 | 31271 | 31377 | - | exon | coding_transcript | ||
14620120 | 14620226 | 31271 | 31377 | - | cds | coding_transcript | ||
14620120 | 14620226 | 31271 | 31377 | - | exon | coding_transcript | ||
14620120 | 14620226 | 31271 | 31377 | - | cds | coding_transcript | ||
14620137 | 14620226 | 31271 | 31360 | - | cds | coding_transcript | ||
14620120 | 14620136 | 31361 | 31377 | - | five_prime_utr | coding_transcript | ||
14616134 | 14620119 | 31378 | 35363 | - | intron | coding_transcript | ||
14619995 | 14620119 | 31378 | 31502 | - | intron | coding_transcript | ||
14619995 | 14620119 | 31378 | 31502 | - | intron | coding_transcript | ||
14619941 | 14619994 | 31503 | 31556 | - | exon | coding_transcript | ||
14619941 | 14619994 | 31503 | 31556 | - | exon | coding_transcript | ||
14619973 | 14619994 | 31503 | 31524 | - | cds | coding_transcript | ||
14619973 | 14619994 | 31503 | 31524 | - | cds | coding_transcript | ||
14619941 | 14619972 | 31525 | 31556 | - | five_prime_utr | coding_transcript | ||
14619941 | 14619972 | 31525 | 31556 | - | five_prime_utr | coding_transcript | ||
14616008 | 14619940 | 31557 | 35489 | - | intron | coding_transcript | ||
14616036 | 14619940 | 31557 | 35461 | - | intron | coding_transcript | ||
14615910 | 14616133 | 35364 | 35587 | - | exon | coding_transcript | ||
14615910 | 14616133 | 35364 | 35587 | - | five_prime_utr | coding_transcript | ||
14615912 | 14616035 | 35462 | 35585 | - | exon | coding_transcript | ||
14615912 | 14616035 | 35462 | 35585 | - | five_prime_utr | coding_transcript | ||
14615912 | 14616007 | 35490 | 35585 | - | exon | coding_transcript | ||
14615912 | 14616007 | 35490 | 35585 | - | five_prime_utr | coding_transcript | ||
14607558 | 14615305 | 36192 | 43939 | - | gene | shd | coding_transcript |
Sets
Oligos
Name/Sequence | Export |
---|---|
CG9628[29544]::S000169_fly_pretag_fwd
TGCTGGACATACTCATCACCCTGCGTTTAGGTGTCCACGGTGATCTAGAAgaagtgcataccaatcaggacccgc
|
Fasta |
CG9628[29544]::S000169_fly_pretag_rev
ATCGAATGTATATCTCTTTCTCGCCAAACTTCACGGGATCGACCATGTCActtgtcgtcgtcatccttgtagtca
|
Fasta |