Clone: 02182476214419926 H04

Tagged gene: Rpn9
Identifier: FBgn0028691

Clone FlyFos015808(pRedFlp-Hgr)(Rpn9[36279]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation

Type Status Download / View
Grows in selection good
NGS-based tag validation good [view]

Genes in pFlyFos vector

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-3R
19578600 19580345 13247 14992 - gene Tbp-1 coding_transcript
19576659 19578552 15040 16933 + gene RanBP3 coding_transcript
19559046 19576868 16724 34546 - gene Hmgcr coding_transcript
19557225 19559184 34408 37429 + gene Rpn9 coding_transcript
19557225 19559184 34408 37429 + mrna FBtr0084469 coding_transcript
19558974 19559184 34408 34618 + exon coding_transcript
19558974 19559184 34408 34618 + five_prime_utr coding_transcript
19558633 19558973 34619 34959 + intron coding_transcript
19557225 19558731 34861 37429 + mrna FBtr0084470 coding_transcript
19558518 19558731 34861 35074 + exon coding_transcript
19558628 19558731 34861 34964 + five_prime_utr coding_transcript
19558518 19558632 34960 35074 + exon coding_transcript
19558628 19558632 34960 34964 + five_prime_utr coding_transcript
19558518 19558627 34965 35074 + cds coding_transcript
19558518 19558627 34965 35074 + cds coding_transcript
19558463 19558517 35075 35129 + intron coding_transcript
19558463 19558517 35075 35129 + intron coding_transcript
19558349 19558462 35130 35243 + exon coding_transcript
19558349 19558462 35130 35243 + cds coding_transcript
19558349 19558462 35130 35243 + exon coding_transcript
19558349 19558462 35130 35243 + cds coding_transcript
19558296 19558348 35244 35296 + intron coding_transcript
19558296 19558348 35244 35296 + intron coding_transcript
19557765 19558295 35297 35827 + exon coding_transcript
19557765 19558295 35297 35827 + cds coding_transcript
19557765 19558295 35297 35827 + exon coding_transcript
19557765 19558295 35297 35827 + cds coding_transcript
19557704 19557764 35828 35888 + intron coding_transcript
19557704 19557764 35828 35888 + intron coding_transcript
19557225 19557703 35889 37429 + exon coding_transcript
19557225 19557703 35889 37429 + exon coding_transcript
19557310 19557703 35889 37344 + cds coding_transcript
19557310 19557703 35889 37344 + cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
1482 1541 36280 36339 + cds 2xTY1 CLC
1548 2264 36346 37062 + cds SGFP CLC
2271 2312 37069 37110 + cds V5 CLC
2313 2336 37111 37134 + cds Precision cut site CLC
2337 2357 37135 37155 + cds TEV CLC
2358 2429 37156 37227 + cds BLRP CLC
3813 3846 37235 37268 + misc_recomb FRT CLC
dmel-5.43-3R
19557225 19557309 37345 37429 + three_prime_utr coding_transcript
19557225 19557309 37345 37429 + three_prime_utr coding_transcript
19549086 19557227 37427 45568 - gene CG10365 coding_transcript
19545198 19546343 48311 49456 + gene CG10232 coding_transcript

Sets

Oligos

Name/Sequence Export
Rpn9[36279]::S000169_fly_pretag_fwd
CGAACATGGAGAAACTGATGGAGAATCGTGCCGCCGAAATCCTCACCAATgaagtgcataccaatcaggacccgc
fasta Fasta
Rpn9[36279]::S000169_fly_pretag_rev
CGCAAAATGTGAATATGTGGGATCGTCTAGATCAGGCGAAACTAAAACTActtgtcgtcgtcatccttgtagtca
fasta Fasta