Clone: 02182476214419926 H01
Tagged gene: Pp2A-29B
Identifier: FBgn0260439
Clone | FlyFos015766(pRedFlp-Hgr)(Pp2A-29B[17745]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
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Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | good | [view] |
Genes in pFlyFos vector
Gene | Clone relative | Genome relative | |||||
---|---|---|---|---|---|---|---|
Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
---|---|---|---|---|---|---|---|---|
pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-2L | ||||||||
8363699 | 8364609 | 11727 | 12637 | - | gene | RpS13 | coding_transcript | |
8364832 | 8365663 | 12860 | 13691 | + | gene | CSN8 | coding_transcript | |
8366009 | 8370082 | 14037 | 19172 | + | gene | Pp2A-29B | coding_transcript | |
8366009 | 8370082 | 14037 | 19172 | + | mrna | FBtr0005088 | coding_transcript | |
8366009 | 8370082 | 14037 | 19172 | + | mrna | FBtr0306102 | coding_transcript | |
8366009 | 8366394 | 14037 | 14422 | + | exon | coding_transcript | ||
8366009 | 8366394 | 14037 | 14422 | + | exon | coding_transcript | ||
8366009 | 8366310 | 14037 | 14338 | + | five_prime_utr | coding_transcript | ||
8366009 | 8366310 | 14037 | 14338 | + | five_prime_utr | coding_transcript | ||
8366033 | 8370082 | 14061 | 19172 | + | mrna | FBtr0100535 | coding_transcript | |
8366033 | 8366081 | 14061 | 14109 | + | exon | coding_transcript | ||
8366033 | 8366081 | 14061 | 14109 | + | five_prime_utr | coding_transcript | ||
8366053 | 8370082 | 14081 | 19172 | + | mrna | FBtr0100533 | coding_transcript | |
8366053 | 8366123 | 14081 | 14151 | + | exon | coding_transcript | ||
8366053 | 8366123 | 14081 | 14151 | + | five_prime_utr | coding_transcript | ||
8366082 | 8366137 | 14110 | 14165 | + | intron | coding_transcript | ||
8366124 | 8366192 | 14152 | 14220 | + | intron | coding_transcript | ||
8366138 | 8366394 | 14166 | 14422 | + | exon | coding_transcript | ||
8366138 | 8366310 | 14166 | 14338 | + | five_prime_utr | coding_transcript | ||
8366193 | 8366394 | 14221 | 14422 | + | exon | coding_transcript | ||
8366193 | 8366310 | 14221 | 14338 | + | five_prime_utr | coding_transcript | ||
8366311 | 8366394 | 14339 | 14422 | + | cds | coding_transcript | ||
8366311 | 8366394 | 14339 | 14422 | + | cds | coding_transcript | ||
8366311 | 8366394 | 14339 | 14422 | + | cds | coding_transcript | ||
8366311 | 8366394 | 14339 | 14422 | + | cds | coding_transcript | ||
8366395 | 8367095 | 14423 | 15123 | + | intron | coding_transcript | ||
8366395 | 8367095 | 14423 | 15123 | + | intron | coding_transcript | ||
8366395 | 8367095 | 14423 | 15123 | + | intron | coding_transcript | ||
8366395 | 8367095 | 14423 | 15123 | + | intron | coding_transcript | ||
8367096 | 8367249 | 15124 | 15277 | + | exon | coding_transcript | ||
8367096 | 8367249 | 15124 | 15277 | + | cds | coding_transcript | ||
8367096 | 8367249 | 15124 | 15277 | + | exon | coding_transcript | ||
8367096 | 8367249 | 15124 | 15277 | + | cds | coding_transcript | ||
8367096 | 8367249 | 15124 | 15277 | + | exon | coding_transcript | ||
8367096 | 8367249 | 15124 | 15277 | + | cds | coding_transcript | ||
8367096 | 8367249 | 15124 | 15277 | + | exon | coding_transcript | ||
8367096 | 8367249 | 15124 | 15277 | + | cds | coding_transcript | ||
8367250 | 8367311 | 15278 | 15339 | + | intron | coding_transcript | ||
8367250 | 8367311 | 15278 | 15339 | + | intron | coding_transcript | ||
8367250 | 8367311 | 15278 | 15339 | + | intron | coding_transcript | ||
8367250 | 8367311 | 15278 | 15339 | + | intron | coding_transcript | ||
8367312 | 8367730 | 15340 | 15758 | + | exon | coding_transcript | ||
8367312 | 8367730 | 15340 | 15758 | + | cds | coding_transcript | ||
8367312 | 8367730 | 15340 | 15758 | + | exon | coding_transcript | ||
8367312 | 8367730 | 15340 | 15758 | + | cds | coding_transcript | ||
8367312 | 8367730 | 15340 | 15758 | + | exon | coding_transcript | ||
8367312 | 8367730 | 15340 | 15758 | + | cds | coding_transcript | ||
8367312 | 8367730 | 15340 | 15758 | + | exon | coding_transcript | ||
8367312 | 8367730 | 15340 | 15758 | + | cds | coding_transcript | ||
8367731 | 8367796 | 15759 | 15824 | + | intron | coding_transcript | ||
8367731 | 8367796 | 15759 | 15824 | + | intron | coding_transcript | ||
8367731 | 8367796 | 15759 | 15824 | + | intron | coding_transcript | ||
8367731 | 8367796 | 15759 | 15824 | + | intron | coding_transcript | ||
8367797 | 8367871 | 15825 | 15899 | + | exon | coding_transcript | ||
8367797 | 8367871 | 15825 | 15899 | + | cds | coding_transcript | ||
8367797 | 8367871 | 15825 | 15899 | + | exon | coding_transcript | ||
8367797 | 8367871 | 15825 | 15899 | + | cds | coding_transcript | ||
8367797 | 8367871 | 15825 | 15899 | + | exon | coding_transcript | ||
8367797 | 8367871 | 15825 | 15899 | + | cds | coding_transcript | ||
8367797 | 8367871 | 15825 | 15899 | + | exon | coding_transcript | ||
8367797 | 8367871 | 15825 | 15899 | + | cds | coding_transcript | ||
8367872 | 8367930 | 15900 | 15958 | + | intron | coding_transcript | ||
8367872 | 8367930 | 15900 | 15958 | + | intron | coding_transcript | ||
8367872 | 8367930 | 15900 | 15958 | + | intron | coding_transcript | ||
8367872 | 8367930 | 15900 | 15958 | + | intron | coding_transcript | ||
8367931 | 8368696 | 15959 | 16724 | + | exon | coding_transcript | ||
8367931 | 8368696 | 15959 | 16724 | + | cds | coding_transcript | ||
8367931 | 8368696 | 15959 | 16724 | + | exon | coding_transcript | ||
8367931 | 8368696 | 15959 | 16724 | + | cds | coding_transcript | ||
8367931 | 8368696 | 15959 | 16724 | + | exon | coding_transcript | ||
8367931 | 8368696 | 15959 | 16724 | + | cds | coding_transcript | ||
8367931 | 8368696 | 15959 | 16724 | + | exon | coding_transcript | ||
8367931 | 8368696 | 15959 | 16724 | + | cds | coding_transcript | ||
8368697 | 8368757 | 16725 | 16785 | + | intron | coding_transcript | ||
8368697 | 8368757 | 16725 | 16785 | + | intron | coding_transcript | ||
8368697 | 8368757 | 16725 | 16785 | + | intron | coding_transcript | ||
8368697 | 8368757 | 16725 | 16785 | + | intron | coding_transcript | ||
8368758 | 8369030 | 16786 | 17058 | + | exon | coding_transcript | ||
8368758 | 8369030 | 16786 | 17058 | + | cds | coding_transcript | ||
8368758 | 8369030 | 16786 | 17058 | + | exon | coding_transcript | ||
8368758 | 8369030 | 16786 | 17058 | + | cds | coding_transcript | ||
8368758 | 8369030 | 16786 | 17058 | + | exon | coding_transcript | ||
8368758 | 8369030 | 16786 | 17058 | + | cds | coding_transcript | ||
8368758 | 8369030 | 16786 | 17058 | + | exon | coding_transcript | ||
8368758 | 8369030 | 16786 | 17058 | + | cds | coding_transcript | ||
8369031 | 8369715 | 17059 | 17743 | + | intron | coding_transcript | ||
8369031 | 8369715 | 17059 | 17743 | + | intron | coding_transcript | ||
8369031 | 8369715 | 17059 | 17743 | + | intron | coding_transcript | ||
8369031 | 8369222 | 17059 | 17250 | + | intron | coding_transcript | ||
8369223 | 8369399 | 17251 | 17427 | + | exon | coding_transcript | ||
8369223 | 8369399 | 17251 | 17427 | + | cds | coding_transcript | ||
8369400 | 8369715 | 17428 | 17743 | + | intron | coding_transcript | ||
8369716 | 8370082 | 17744 | 19172 | + | exon | coding_transcript | ||
8369716 | 8370082 | 17744 | 19172 | + | exon | coding_transcript | ||
8369716 | 8370082 | 17744 | 19172 | + | exon | coding_transcript | ||
8369716 | 8370082 | 17744 | 19172 | + | exon | coding_transcript | ||
8369716 | 8369720 | 17744 | 18810 | + | cds | coding_transcript | ||
8369716 | 8369720 | 17744 | 18810 | + | cds | coding_transcript | ||
8369716 | 8369720 | 17744 | 18810 | + | cds | coding_transcript | ||
8369716 | 8369720 | 17744 | 18810 | + | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
1482 | 1541 | 17746 | 17805 | + | cds | 2xTY1 | CLC | |
1548 | 2264 | 17812 | 18528 | + | cds | SGFP | CLC | |
2271 | 2312 | 18535 | 18576 | + | cds | V5 | CLC | |
2313 | 2336 | 18577 | 18600 | + | cds | Precision cut site | CLC | |
2337 | 2357 | 18601 | 18621 | + | cds | TEV | CLC | |
2358 | 2429 | 18622 | 18693 | + | cds | BLRP | CLC | |
3813 | 3846 | 18701 | 18734 | + | misc_recomb | FRT | CLC | |
dmel-5.43-2L | ||||||||
8369721 | 8370082 | 18811 | 19172 | + | three_prime_utr | coding_transcript | ||
8369721 | 8370082 | 18811 | 19172 | + | three_prime_utr | coding_transcript | ||
8369721 | 8370082 | 18811 | 19172 | + | three_prime_utr | coding_transcript | ||
8369721 | 8370082 | 18811 | 19172 | + | three_prime_utr | coding_transcript | ||
8370513 | 8374250 | 19603 | 23340 | + | gene | CG17292 | coding_transcript | |
8374481 | 8375549 | 23571 | 24639 | + | gene | Wdr82 | coding_transcript | |
8375501 | 8376777 | 24591 | 25867 | - | gene | CG13390 | coding_transcript | |
8377051 | 8378206 | 26141 | 27296 | + | gene | CG17294 | coding_transcript | |
8378262 | 8381756 | 27352 | 30846 | - | gene | Aats-ala | coding_transcript | |
8381905 | 8382723 | 30995 | 31813 | - | gene | CG13392 | coding_transcript | |
8382815 | 8383657 | 31905 | 32747 | + | gene | Rcd4 | coding_transcript | |
8383612 | 8384132 | 32702 | 33222 | - | gene | l(2)k12914 | coding_transcript | |
8384430 | 8388804 | 33520 | 37894 | + | gene | CG13384 | coding_transcript | |
8388728 | 8389304 | 37818 | 38394 | - | gene | CG42819 | coding_transcript | |
8389881 | 8392398 | 38971 | 41488 | - | gene | CG42820 | coding_transcript | |
8392466 | 8393239 | 41556 | 42329 | - | gene | Acp29AB | coding_transcript |
Sets
Oligos
Name/Sequence | Export |
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Pp2A-29B[17745]::S000169_fly_pretag_fwd
CCACTCTGTGTTCGTCTGCAATAATGTGTTTTGTATATTTGTTTATAGCGgaagtgcataccaatcaggacccgc
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Pp2A-29B[17745]::S000169_fly_pretag_rev
TACATACAGTTTTAAAAATAGAATAAAAAAAGATGCAAGAAGGTTGATTActtgtcgtcgtcatccttgtagtca
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