Clone: 14763769501329638 G08
Tagged gene: Dcp2
Identifier: FBgn0036534
| Clone | FlyFos015728(pRedFlp-Hgr)(Dcp2[29933]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
|---|---|
| Library | FlyFos 5.43 D.mel in E. coli EPI300 |
| Genome | Species: Drosophila melanogaster, Release: 5.43 |
GenBank
GFF
Validation(click to hide details)
| Type | Status | Download / View |
|---|---|---|
| Grows in selection | good | |
| NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
| Gene | Clone relative | Genome relative | |||||
|---|---|---|---|---|---|---|---|
| Name | Length | Start | End | Strand | Start | End | Strand |
| DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
| Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
|---|---|---|---|---|---|---|---|---|
| pFlyFos | ||||||||
| 1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
| 4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
| 310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
| 727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
| 1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
| 2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
| 2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
| 3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
| 4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
| 5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
| 6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
| 7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
| 8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
| 8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
| 8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
| 8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
| 9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
| 9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
| 9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
| 9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
| dmel-5.43-3L | ||||||||
| 15801518 | 15801819 | 16904 | 17205 | + | gene | CG6244 | coding_transcript | |
| 15802598 | 15802983 | 17984 | 18369 | + | gene | CG13445 | coding_transcript | |
| 15803218 | 15809515 | 18604 | 24901 | - | gene | fwe | coding_transcript | |
| 15810090 | 15811721 | 25476 | 27107 | + | gene | CkIIalpha-i1 | coding_transcript | |
| 15811834 | 15819520 | 27220 | 35968 | - | gene | Dcp2 | coding_transcript | |
| 15811834 | 15819520 | 27220 | 35968 | - | mrna | FBtr0304975 | coding_transcript | |
| 15811834 | 15815114 | 27220 | 31562 | - | exon | coding_transcript | ||
| 15811834 | 15814544 | 27220 | 29930 | - | three_prime_utr | coding_transcript | ||
| 15814100 | 15819520 | 29486 | 35968 | - | mrna | FBtr0075538 | coding_transcript | |
| 15814100 | 15819520 | 29486 | 35968 | - | mrna | FBtr0075539 | coding_transcript | |
| 15814100 | 15817563 | 29486 | 34011 | - | mrna | FBtr0075540 | coding_transcript | |
| 15814100 | 15817304 | 29486 | 33752 | - | mrna | FBtr0100528 | coding_transcript | |
| 15814100 | 15815114 | 29486 | 31562 | - | exon | coding_transcript | ||
| 15814100 | 15815111 | 29486 | 31559 | - | exon | coding_transcript | ||
| 15814100 | 15815111 | 29486 | 31559 | - | exon | coding_transcript | ||
| 15814100 | 15815111 | 29486 | 31559 | - | exon | coding_transcript | ||
| 15814100 | 15814544 | 29486 | 29930 | - | three_prime_utr | coding_transcript | ||
| 15814100 | 15814544 | 29486 | 29930 | - | three_prime_utr | coding_transcript | ||
| 15814100 | 15814544 | 29486 | 29930 | - | three_prime_utr | coding_transcript | ||
| 15814100 | 15814544 | 29486 | 29930 | - | three_prime_utr | coding_transcript | ||
| 15814545 | 15815114 | 29931 | 31562 | - | cds | coding_transcript | ||
| 15814545 | 15815114 | 29931 | 31562 | - | cds | coding_transcript | ||
| 15814545 | 15815111 | 29931 | 31559 | - | cds | coding_transcript | ||
| 15814545 | 15815111 | 29931 | 31559 | - | cds | coding_transcript | ||
| 15814545 | 15815111 | 29931 | 31559 | - | cds | coding_transcript | ||
| p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
| 2437 | 2470 | 30007 | 30040 | - | misc_recomb | FRT | CLC | |
| 2358 | 2429 | 30048 | 30119 | - | cds | BLRP | CLC | |
| 2337 | 2357 | 30120 | 30140 | - | cds | TEV | CLC | |
| 2313 | 2336 | 30141 | 30164 | - | cds | Precision cut site | CLC | |
| 2271 | 2312 | 30165 | 30206 | - | cds | V5 | CLC | |
| 1548 | 2264 | 30213 | 30929 | - | cds | SGFP | CLC | |
| 1482 | 1541 | 30936 | 30995 | - | cds | 2xTY1 | CLC | |
| dmel-5.43-3L | ||||||||
| 15815112 | 15815170 | 31560 | 31618 | - | intron | coding_transcript | ||
| 15815112 | 15815170 | 31560 | 31618 | - | intron | coding_transcript | ||
| 15815112 | 15815170 | 31560 | 31618 | - | intron | coding_transcript | ||
| 15815115 | 15815170 | 31563 | 31618 | - | intron | coding_transcript | ||
| 15815115 | 15815170 | 31563 | 31618 | - | intron | coding_transcript | ||
| 15815171 | 15815908 | 31619 | 32356 | - | exon | coding_transcript | ||
| 15815171 | 15815908 | 31619 | 32356 | - | cds | coding_transcript | ||
| 15815171 | 15815908 | 31619 | 32356 | - | exon | coding_transcript | ||
| 15815171 | 15815908 | 31619 | 32356 | - | cds | coding_transcript | ||
| 15815171 | 15815908 | 31619 | 32356 | - | exon | coding_transcript | ||
| 15815171 | 15815908 | 31619 | 32356 | - | cds | coding_transcript | ||
| 15815171 | 15815908 | 31619 | 32356 | - | exon | coding_transcript | ||
| 15815171 | 15815908 | 31619 | 32356 | - | cds | coding_transcript | ||
| 15815171 | 15815908 | 31619 | 32356 | - | exon | coding_transcript | ||
| 15815171 | 15815908 | 31619 | 32356 | - | cds | coding_transcript | ||
| 15815909 | 15816062 | 32357 | 32510 | - | intron | coding_transcript | ||
| 15815909 | 15816062 | 32357 | 32510 | - | intron | coding_transcript | ||
| 15815909 | 15816062 | 32357 | 32510 | - | intron | coding_transcript | ||
| 15815909 | 15816062 | 32357 | 32510 | - | intron | coding_transcript | ||
| 15815909 | 15816023 | 32357 | 32471 | - | intron | coding_transcript | ||
| 15816024 | 15816281 | 32472 | 32729 | - | exon | coding_transcript | ||
| 15816024 | 15816281 | 32472 | 32729 | - | cds | coding_transcript | ||
| 15816063 | 15816281 | 32511 | 32729 | - | exon | coding_transcript | ||
| 15816063 | 15816281 | 32511 | 32729 | - | cds | coding_transcript | ||
| 15816063 | 15816281 | 32511 | 32729 | - | exon | coding_transcript | ||
| 15816063 | 15816281 | 32511 | 32729 | - | cds | coding_transcript | ||
| 15816063 | 15816281 | 32511 | 32729 | - | exon | coding_transcript | ||
| 15816063 | 15816281 | 32511 | 32729 | - | cds | coding_transcript | ||
| 15816063 | 15816281 | 32511 | 32729 | - | exon | coding_transcript | ||
| 15816063 | 15816281 | 32511 | 32729 | - | cds | coding_transcript | ||
| 15816282 | 15816346 | 32730 | 32794 | - | intron | coding_transcript | ||
| 15816282 | 15816346 | 32730 | 32794 | - | intron | coding_transcript | ||
| 15816282 | 15816346 | 32730 | 32794 | - | intron | coding_transcript | ||
| 15816282 | 15816346 | 32730 | 32794 | - | intron | coding_transcript | ||
| 15816282 | 15816346 | 32730 | 32794 | - | intron | coding_transcript | ||
| 15816347 | 15817089 | 32795 | 33537 | - | exon | coding_transcript | ||
| 15816347 | 15817089 | 32795 | 33537 | - | cds | coding_transcript | ||
| 15816347 | 15817089 | 32795 | 33537 | - | exon | coding_transcript | ||
| 15816347 | 15817089 | 32795 | 33537 | - | cds | coding_transcript | ||
| 15816347 | 15817089 | 32795 | 33537 | - | exon | coding_transcript | ||
| 15816347 | 15817089 | 32795 | 33537 | - | exon | coding_transcript | ||
| 15816347 | 15817089 | 32795 | 33537 | - | cds | coding_transcript | ||
| 15816347 | 15816855 | 32795 | 33303 | - | exon | coding_transcript | ||
| 15816347 | 15816517 | 32795 | 32965 | - | cds | coding_transcript | ||
| 15816347 | 15816517 | 32795 | 32965 | - | cds | coding_transcript | ||
| 15816518 | 15817089 | 32966 | 33537 | - | five_prime_utr | coding_transcript | ||
| 15816518 | 15816855 | 32966 | 33303 | - | five_prime_utr | coding_transcript | ||
| 15816856 | 15816914 | 33304 | 33362 | - | intron | coding_transcript | ||
| 15816915 | 15817089 | 33363 | 33537 | - | exon | coding_transcript | ||
| 15816915 | 15817089 | 33363 | 33537 | - | five_prime_utr | coding_transcript | ||
| 15817090 | 15819385 | 33538 | 35833 | - | intron | coding_transcript | ||
| 15817090 | 15818570 | 33538 | 35018 | - | intron | coding_transcript | ||
| 15817090 | 15818570 | 33538 | 35018 | - | intron | coding_transcript | ||
| 15817090 | 15817547 | 33538 | 33995 | - | intron | coding_transcript | ||
| 15817090 | 15817267 | 33538 | 33715 | - | intron | coding_transcript | ||
| 15817268 | 15817304 | 33716 | 33752 | - | exon | coding_transcript | ||
| 15817268 | 15817304 | 33716 | 33752 | - | five_prime_utr | coding_transcript | ||
| 15817548 | 15817563 | 33996 | 34011 | - | exon | coding_transcript | ||
| 15817548 | 15817563 | 33996 | 34011 | - | cds | coding_transcript | ||
| 15818571 | 15819520 | 35019 | 35968 | - | exon | coding_transcript | ||
| 15818571 | 15819520 | 35019 | 35968 | - | exon | coding_transcript | ||
| 15818571 | 15818679 | 35019 | 35127 | - | cds | coding_transcript | ||
| 15818571 | 15818679 | 35019 | 35127 | - | cds | coding_transcript | ||
| 15818680 | 15819520 | 35128 | 35968 | - | five_prime_utr | coding_transcript | ||
| 15818680 | 15819520 | 35128 | 35968 | - | five_prime_utr | coding_transcript | ||
| 15819386 | 15819520 | 35834 | 35968 | - | exon | coding_transcript | ||
| 15819386 | 15819520 | 35834 | 35968 | - | five_prime_utr | coding_transcript | ||
| 15819980 | 15825104 | 36428 | 41552 | + | gene | dbo | coding_transcript | |
| 15825560 | 15827043 | 42008 | 43491 | + | gene | CG12713 | coding_transcript | |
| 15826895 | 15828486 | 43343 | 44934 | - | gene | CG18081 | coding_transcript | |
| 15828855 | 15830580 | 45303 | 47028 | - | gene | CG15715 | coding_transcript | |
Sets(click to hide details)
Oligos(click to hide details)
| Name/Sequence | Export |
|---|---|
|
Dcp2[29933]::S000169_fly_pretag_rev
ATTGAGAGTTTTAAAAGGAAGTGTGTGTGATTGACTCAAAGAAAAGTTTActtgtcgtcgtcatccttgtagtca
|
Fasta
|
|
Dcp2[29933]::S000169_fly_pretag_fwd
CGTGGACGAATTTCTCCTTTACCAAGAACTTCATAGCAAATGTGTTTTGCgaagtgcataccaatcaggacccgc
|
Fasta
|