Clone: 14763769501329638 E07
Tagged gene: CG4538
Identifier: FBgn0038745
Clone | FlyFos015709(pRedFlp-Hgr)(CG4538[18566]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
---|---|
Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation(click to hide details)
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
Gene | Clone relative | Genome relative | |||||
---|---|---|---|---|---|---|---|
Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
---|---|---|---|---|---|---|---|---|
pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-3R | ||||||||
15729384 | 15730589 | 13298 | 14503 | + | gene | Surf6 | coding_transcript | |
15724548 | 15729411 | 14476 | 20401 | + | gene | CG4538 | coding_transcript | |
15724548 | 15729411 | 14476 | 20401 | + | mrna | FBtr0083855 | coding_transcript | |
15724548 | 15729411 | 14476 | 20401 | + | mrna | FBtr0083856 | coding_transcript | |
15728554 | 15729411 | 14476 | 15333 | + | exon | coding_transcript | ||
15728563 | 15729411 | 14476 | 15324 | + | exon | coding_transcript | ||
15728621 | 15729411 | 14476 | 15266 | + | five_prime_utr | coding_transcript | ||
15728621 | 15729411 | 14476 | 15266 | + | five_prime_utr | coding_transcript | ||
15728554 | 15728620 | 15267 | 15333 | + | cds | coding_transcript | ||
15728563 | 15728620 | 15267 | 15324 | + | cds | coding_transcript | ||
15727533 | 15728562 | 15325 | 16354 | + | intron | coding_transcript | ||
15727524 | 15728553 | 15334 | 16363 | + | intron | coding_transcript | ||
15726154 | 15727532 | 16355 | 17733 | + | exon | coding_transcript | ||
15726154 | 15727532 | 16355 | 17733 | + | cds | coding_transcript | ||
15726154 | 15727523 | 16364 | 17733 | + | exon | coding_transcript | ||
15726154 | 15727523 | 16364 | 17733 | + | cds | coding_transcript | ||
15726097 | 15726153 | 17734 | 17790 | + | intron | coding_transcript | ||
15726097 | 15726153 | 17734 | 17790 | + | intron | coding_transcript | ||
15725947 | 15726096 | 17791 | 17940 | + | exon | coding_transcript | ||
15725947 | 15726096 | 17791 | 17940 | + | cds | coding_transcript | ||
15725947 | 15726096 | 17791 | 17940 | + | exon | coding_transcript | ||
15725947 | 15726096 | 17791 | 17940 | + | cds | coding_transcript | ||
15725818 | 15725946 | 17941 | 18069 | + | intron | coding_transcript | ||
15725818 | 15725946 | 17941 | 18069 | + | intron | coding_transcript | ||
15725596 | 15725817 | 18070 | 18291 | + | exon | coding_transcript | ||
15725596 | 15725817 | 18070 | 18291 | + | cds | coding_transcript | ||
15725596 | 15725817 | 18070 | 18291 | + | exon | coding_transcript | ||
15725596 | 15725817 | 18070 | 18291 | + | cds | coding_transcript | ||
15725531 | 15725595 | 18292 | 18356 | + | intron | coding_transcript | ||
15725531 | 15725595 | 18292 | 18356 | + | intron | coding_transcript | ||
15724548 | 15725530 | 18357 | 20401 | + | exon | coding_transcript | ||
15724548 | 15725530 | 18357 | 20401 | + | exon | coding_transcript | ||
15725318 | 15725530 | 18357 | 19631 | + | cds | coding_transcript | ||
15725318 | 15725530 | 18357 | 19631 | + | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
1482 | 1541 | 18567 | 18626 | + | cds | 2xTY1 | CLC | |
1548 | 2264 | 18633 | 19349 | + | cds | SGFP | CLC | |
2271 | 2312 | 19356 | 19397 | + | cds | V5 | CLC | |
2313 | 2336 | 19398 | 19421 | + | cds | Precision cut site | CLC | |
2337 | 2357 | 19422 | 19442 | + | cds | TEV | CLC | |
2358 | 2429 | 19443 | 19514 | + | cds | BLRP | CLC | |
3813 | 3846 | 19522 | 19555 | + | misc_recomb | FRT | CLC | |
dmel-5.43-3R | ||||||||
15724548 | 15725317 | 19632 | 20401 | + | three_prime_utr | coding_transcript | ||
15724548 | 15725317 | 19632 | 20401 | + | three_prime_utr | coding_transcript | ||
15716570 | 15724460 | 20489 | 28379 | - | gene | CG4733 | coding_transcript | |
15711968 | 15713928 | 31021 | 32981 | + | gene | ninaE | coding_transcript | |
15705441 | 15711758 | 33191 | 39508 | - | gene | Pk92B | coding_transcript | |
15703470 | 15705034 | 39915 | 41479 | - | gene | Arc42 | coding_transcript | |
15701692 | 15703160 | 41789 | 43257 | + | gene | CG17186 | coding_transcript |
Sets(click to hide details)
Oligos(click to hide details)
Name/Sequence | Export |
---|---|
CG4538[18566]::S000169_fly_pretag_rev
TCGATTTCTGTTTTGGTTGGCTTTGGATGTGGGTATCTCTGTTTGATTTActtgtcgtcgtcatccttgtagtca
|
Fasta |
CG4538[18566]::S000169_fly_pretag_fwd
CCGATAATGATAAGAACTTTGAGAATAGTGAGAAAGTACGACTAAAACAGgaagtgcataccaatcaggacccgc
|
Fasta |