Clone: 14763769501329638 D03

Tagged gene: rab3-GEF
Identifier: FBgn0030613

Clone FlyFos015665(pRedFlp-Hgr)(rab3-GEF[17550]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation good [view]

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-X
15007335 15010572 13051 16288 + gene Cyp4s3 coding_transcript
14983715 15007777 15846 40970 - gene rab3-GEF coding_transcript
14983715 15007777 15846 40970 - mrna FBtr0307207 coding_transcript
14983715 15007777 15846 40970 - mrna FBtr0307208 coding_transcript
14983715 15007777 15846 40970 - mrna FBtr0307209 coding_transcript
15005101 15007777 15846 19584 - exon coding_transcript
15005101 15007777 15846 19584 - exon coding_transcript
15005101 15007777 15846 19584 - exon coding_transcript
15006076 15007777 15846 17547 - three_prime_utr coding_transcript
15006076 15007777 15846 17547 - three_prime_utr coding_transcript
15006076 15007777 15846 17547 - three_prime_utr coding_transcript
15005101 15006075 17548 19584 - cds coding_transcript
15005101 15006075 17548 19584 - cds coding_transcript
15005101 15006075 17548 19584 - cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
2437 2470 17624 17657 - misc_recomb FRT CLC
2358 2429 17665 17736 - cds BLRP CLC
2337 2357 17737 17757 - cds TEV CLC
2313 2336 17758 17781 - cds Precision cut site CLC
2271 2312 17782 17823 - cds V5 CLC
1548 2264 17830 18546 - cds SGFP CLC
1482 1541 18553 18612 - cds 2xTY1 CLC
dmel-5.43-X
15003927 15005100 19585 20758 - intron coding_transcript
15003927 15005100 19585 20758 - intron coding_transcript
15003927 15005100 19585 20758 - intron coding_transcript
14983715 15004732 19953 40970 - mrna FBtr0307210 coding_transcript
15004497 15004732 19953 20188 - exon coding_transcript
15004677 15004732 19953 20008 - three_prime_utr coding_transcript
15004497 15004676 20009 20188 - cds coding_transcript
15003927 15004496 20189 20758 - intron coding_transcript
15003880 15003926 20759 20805 - exon coding_transcript
15003880 15003926 20759 20805 - cds coding_transcript
15003880 15003926 20759 20805 - exon coding_transcript
15003880 15003926 20759 20805 - cds coding_transcript
15003880 15003926 20759 20805 - exon coding_transcript
15003880 15003926 20759 20805 - cds coding_transcript
15003880 15003926 20759 20805 - exon coding_transcript
15003880 15003926 20759 20805 - cds coding_transcript
15003803 15003879 20806 20882 - intron coding_transcript
15003803 15003879 20806 20882 - intron coding_transcript
15003803 15003879 20806 20882 - intron coding_transcript
15003803 15003879 20806 20882 - intron coding_transcript
15003730 15003802 20883 20955 - exon coding_transcript
15003730 15003802 20883 20955 - cds coding_transcript
15003730 15003802 20883 20955 - exon coding_transcript
15003730 15003802 20883 20955 - cds coding_transcript
15003730 15003802 20883 20955 - exon coding_transcript
15003730 15003802 20883 20955 - cds coding_transcript
15003730 15003802 20883 20955 - exon coding_transcript
15003730 15003802 20883 20955 - cds coding_transcript
14997178 15003729 20956 27507 - intron coding_transcript
14997178 15003729 20956 27507 - intron coding_transcript
14997178 15003729 20956 27507 - intron coding_transcript
15000483 15003729 20956 24202 - intron coding_transcript
15000474 15000482 24203 24211 - exon coding_transcript
15000474 15000482 24203 24211 - cds coding_transcript
14997178 15000473 24212 27507 - intron coding_transcript
14997010 14997177 27508 27675 - exon coding_transcript
14997010 14997177 27508 27675 - cds coding_transcript
14997010 14997177 27508 27675 - exon coding_transcript
14997010 14997177 27508 27675 - cds coding_transcript
14997010 14997177 27508 27675 - exon coding_transcript
14997010 14997177 27508 27675 - cds coding_transcript
14997010 14997177 27508 27675 - exon coding_transcript
14997010 14997177 27508 27675 - cds coding_transcript
14996939 14997009 27676 27746 - intron coding_transcript
14996939 14997009 27676 27746 - intron coding_transcript
14996939 14997009 27676 27746 - intron coding_transcript
14996939 14997009 27676 27746 - intron coding_transcript
14996666 14996938 27747 28019 - exon coding_transcript
14996666 14996938 27747 28019 - cds coding_transcript
14996666 14996938 27747 28019 - exon coding_transcript
14996666 14996938 27747 28019 - cds coding_transcript
14996666 14996938 27747 28019 - exon coding_transcript
14996666 14996938 27747 28019 - cds coding_transcript
14996666 14996938 27747 28019 - exon coding_transcript
14996666 14996938 27747 28019 - cds coding_transcript
14996602 14996665 28020 28083 - intron coding_transcript
14996602 14996665 28020 28083 - intron coding_transcript
14996602 14996665 28020 28083 - intron coding_transcript
14996602 14996665 28020 28083 - intron coding_transcript
14996362 14996601 28084 28323 - exon coding_transcript
14996362 14996601 28084 28323 - cds coding_transcript
14996362 14996601 28084 28323 - exon coding_transcript
14996362 14996601 28084 28323 - cds coding_transcript
14996362 14996601 28084 28323 - exon coding_transcript
14996362 14996601 28084 28323 - cds coding_transcript
14996362 14996601 28084 28323 - exon coding_transcript
14996362 14996601 28084 28323 - cds coding_transcript
14996304 14996361 28324 28381 - intron coding_transcript
14996304 14996361 28324 28381 - intron coding_transcript
14996304 14996361 28324 28381 - intron coding_transcript
14996304 14996361 28324 28381 - intron coding_transcript
14996046 14996303 28382 28639 - exon coding_transcript
14996046 14996303 28382 28639 - cds coding_transcript
14996046 14996303 28382 28639 - exon coding_transcript
14996046 14996303 28382 28639 - cds coding_transcript
14996046 14996303 28382 28639 - exon coding_transcript
14996046 14996303 28382 28639 - cds coding_transcript
14996046 14996303 28382 28639 - exon coding_transcript
14996046 14996303 28382 28639 - cds coding_transcript
14995206 14996045 28640 29479 - intron coding_transcript
14995206 14996045 28640 29479 - intron coding_transcript
14995729 14996045 28640 28956 - intron coding_transcript
14995729 14996045 28640 28956 - intron coding_transcript
14995633 14995728 28957 29052 - exon coding_transcript
14995633 14995728 28957 29052 - cds coding_transcript
14995633 14995728 28957 29052 - exon coding_transcript
14995633 14995728 28957 29052 - cds coding_transcript
14995206 14995632 29053 29479 - intron coding_transcript
14995206 14995632 29053 29479 - intron coding_transcript
14994723 14995205 29480 29962 - exon coding_transcript
14994723 14995205 29480 29962 - cds coding_transcript
14994723 14995205 29480 29962 - exon coding_transcript
14994723 14995205 29480 29962 - cds coding_transcript
14994723 14995205 29480 29962 - exon coding_transcript
14994723 14995205 29480 29962 - cds coding_transcript
14994723 14995205 29480 29962 - exon coding_transcript
14994723 14995205 29480 29962 - cds coding_transcript
14994662 14994722 29963 30023 - intron coding_transcript
14994662 14994722 29963 30023 - intron coding_transcript
14994662 14994722 29963 30023 - intron coding_transcript
14994662 14994722 29963 30023 - intron coding_transcript
14994276 14994661 30024 30409 - exon coding_transcript
14994276 14994661 30024 30409 - cds coding_transcript
14994276 14994661 30024 30409 - exon coding_transcript
14994276 14994661 30024 30409 - cds coding_transcript
14994276 14994661 30024 30409 - exon coding_transcript
14994276 14994661 30024 30409 - cds coding_transcript
14994276 14994661 30024 30409 - exon coding_transcript
14994276 14994661 30024 30409 - cds coding_transcript
14994216 14994275 30410 30469 - intron coding_transcript
14994216 14994275 30410 30469 - intron coding_transcript
14994216 14994275 30410 30469 - intron coding_transcript
14994216 14994275 30410 30469 - intron coding_transcript
14993846 14994215 30470 30839 - exon coding_transcript
14993846 14994215 30470 30839 - cds coding_transcript
14993846 14994215 30470 30839 - exon coding_transcript
14993846 14994215 30470 30839 - cds coding_transcript
14993846 14994215 30470 30839 - exon coding_transcript
14993846 14994215 30470 30839 - cds coding_transcript
14993846 14994215 30470 30839 - exon coding_transcript
14993846 14994215 30470 30839 - cds coding_transcript
14993071 14993845 30840 31614 - intron coding_transcript
14993071 14993845 30840 31614 - intron coding_transcript
14993071 14993845 30840 31614 - intron coding_transcript
14993333 14993845 30840 31352 - intron coding_transcript
14993282 14993332 31353 31403 - exon coding_transcript
14993282 14993332 31353 31403 - cds coding_transcript
14993071 14993281 31404 31614 - intron coding_transcript
14992867 14993070 31615 31818 - exon coding_transcript
14992867 14993070 31615 31818 - cds coding_transcript
14992867 14993070 31615 31818 - exon coding_transcript
14992867 14993070 31615 31818 - cds coding_transcript
14992867 14993070 31615 31818 - exon coding_transcript
14992867 14993070 31615 31818 - cds coding_transcript
14992867 14993070 31615 31818 - exon coding_transcript
14992867 14993070 31615 31818 - cds coding_transcript
14992799 14992866 31819 31886 - intron coding_transcript
14992799 14992866 31819 31886 - intron coding_transcript
14992799 14992866 31819 31886 - intron coding_transcript
14992799 14992866 31819 31886 - intron coding_transcript
14991661 14992798 31887 33024 - exon coding_transcript
14991661 14992798 31887 33024 - cds coding_transcript
14991661 14992798 31887 33024 - exon coding_transcript
14991661 14992798 31887 33024 - cds coding_transcript
14991661 14992798 31887 33024 - exon coding_transcript
14991661 14992798 31887 33024 - cds coding_transcript
14991661 14992798 31887 33024 - exon coding_transcript
14991661 14992798 31887 33024 - cds coding_transcript
14991584 14991660 33025 33101 - intron coding_transcript
14991584 14991660 33025 33101 - intron coding_transcript
14991584 14991660 33025 33101 - intron coding_transcript
14991584 14991660 33025 33101 - intron coding_transcript
14991489 14991583 33102 33196 - exon coding_transcript
14991489 14991583 33102 33196 - cds coding_transcript
14991489 14991583 33102 33196 - exon coding_transcript
14991489 14991583 33102 33196 - cds coding_transcript
14991489 14991583 33102 33196 - exon coding_transcript
14991489 14991583 33102 33196 - cds coding_transcript
14991489 14991583 33102 33196 - exon coding_transcript
14991489 14991583 33102 33196 - cds coding_transcript
14989247 14991488 33197 35438 - intron coding_transcript
14989247 14991488 33197 35438 - intron coding_transcript
14989247 14991488 33197 35438 - intron coding_transcript
14989247 14991488 33197 35438 - intron coding_transcript
14989491 14990075 34610 35194 + gene CG9072 coding_transcript
14989491 14990075 34610 35194 + mrna FBtr0074029 coding_transcript
14989491 14990075 34610 35194 + exon coding_transcript
14989993 14990075 34610 34692 + five_prime_utr coding_transcript
14989543 14989992 34693 35142 + cds coding_transcript
14989491 14989542 35143 35194 + three_prime_utr coding_transcript
14989120 14989246 35439 35565 - exon coding_transcript
14989120 14989246 35439 35565 - cds coding_transcript
14989120 14989246 35439 35565 - exon coding_transcript
14989120 14989246 35439 35565 - cds coding_transcript
14989120 14989246 35439 35565 - exon coding_transcript
14989120 14989246 35439 35565 - cds coding_transcript
14989120 14989246 35439 35565 - exon coding_transcript
14989120 14989246 35439 35565 - cds coding_transcript
14989062 14989119 35566 35623 - intron coding_transcript
14989062 14989119 35566 35623 - intron coding_transcript
14989062 14989119 35566 35623 - intron coding_transcript
14989062 14989119 35566 35623 - intron coding_transcript
14988700 14989061 35624 35985 - exon coding_transcript
14988700 14989061 35624 35985 - cds coding_transcript
14988700 14989061 35624 35985 - exon coding_transcript
14988700 14989061 35624 35985 - cds coding_transcript
14988700 14989061 35624 35985 - exon coding_transcript
14988700 14989061 35624 35985 - cds coding_transcript
14988700 14989061 35624 35985 - exon coding_transcript
14988700 14989061 35624 35985 - cds coding_transcript
14988647 14988699 35986 36038 - intron coding_transcript
14988647 14988699 35986 36038 - intron coding_transcript
14988647 14988699 35986 36038 - intron coding_transcript
14988647 14988699 35986 36038 - intron coding_transcript
14988103 14988646 36039 36582 - exon coding_transcript
14988103 14988646 36039 36582 - cds coding_transcript
14988127 14988646 36039 36558 - exon coding_transcript
14988127 14988646 36039 36558 - cds coding_transcript
14988127 14988646 36039 36558 - exon coding_transcript
14988127 14988646 36039 36558 - cds coding_transcript
14988136 14988646 36039 36549 - exon coding_transcript
14988136 14988646 36039 36549 - cds coding_transcript
14988002 14988135 36550 36683 - intron coding_transcript
14988002 14988126 36559 36683 - intron coding_transcript
14988002 14988126 36559 36683 - intron coding_transcript
14988002 14988102 36583 36683 - intron coding_transcript
14987589 14988001 36684 37096 - exon coding_transcript
14987589 14988001 36684 37096 - cds coding_transcript
14987589 14988001 36684 37096 - exon coding_transcript
14987589 14988001 36684 37096 - cds coding_transcript
14987589 14988001 36684 37096 - exon coding_transcript
14987589 14988001 36684 37096 - cds coding_transcript
14987589 14988001 36684 37096 - exon coding_transcript
14987589 14988001 36684 37096 - cds coding_transcript
14987409 14987588 37097 37276 - intron coding_transcript
14987409 14987588 37097 37276 - intron coding_transcript
14987409 14987588 37097 37276 - intron coding_transcript
14987409 14987588 37097 37276 - intron coding_transcript
14987271 14987408 37277 37414 - exon coding_transcript
14987271 14987408 37277 37414 - exon coding_transcript
14987286 14987408 37277 37399 - cds coding_transcript
14987286 14987408 37277 37399 - exon coding_transcript
14987286 14987408 37277 37399 - cds coding_transcript
14987286 14987408 37277 37399 - exon coding_transcript
14987286 14987408 37277 37399 - cds coding_transcript
14987286 14987408 37277 37399 - cds coding_transcript
14983995 14987285 37400 40690 - intron coding_transcript
14983995 14987285 37400 40690 - intron coding_transcript
14987271 14987285 37400 37414 - five_prime_utr coding_transcript
14987271 14987285 37400 37414 - five_prime_utr coding_transcript
14983995 14987270 37415 40690 - intron coding_transcript
14983995 14987270 37415 40690 - intron coding_transcript
14983715 14983994 40691 40970 - exon coding_transcript
14983715 14983994 40691 40970 - five_prime_utr coding_transcript
14983715 14983994 40691 40970 - exon coding_transcript
14983715 14983994 40691 40970 - five_prime_utr coding_transcript
14983715 14983994 40691 40970 - exon coding_transcript
14983715 14983994 40691 40970 - five_prime_utr coding_transcript
14983715 14983994 40691 40970 - exon coding_transcript
14983715 14983994 40691 40970 - five_prime_utr coding_transcript
14980171 14982665 42020 44514 - gene CG5599 coding_transcript
14979194 14979840 44845 45491 + gene CG15027 coding_transcript
14978054 14978688 45997 46631 + gene CG9065 coding_transcript
14976860 14977812 46873 47825 - gene CG33178 coding_transcript
14975582 14976226 48459 49103 - gene CG33177 coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
rab3-GEF[17550]::S000169_fly_pretag_rev
CCACCTCCGCCTCCGCCGCCTCCAAACTTAAAGAACGAACTCCTTCGTCActtgtcgtcgtcatccttgtagtca
fasta Fasta
rab3-GEF[17550]::S000169_fly_pretag_fwd
CGGCATCGGGCTCCATTGCCAGCGCTTCACCGCAGGCCCATCGCAAGCACgaagtgcataccaatcaggacccgc
fasta Fasta