Clone: 3185971607969933 H04

Tagged gene: foi
Identifier: FBgn0024236

Clone FlyFos015423(pRedFlp-Hgr)(foi[40973]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation

Type Status Download / View
Grows in selection good
NGS-based tag validation bad
Whole tag sequencing full download [show/hide details]

Genes in pFlyFos vector

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-3L
8500569 8502865 15340 17636 - gene ZC3H3 coding_transcript
8503138 8506104 17909 20875 + gene CG6745 coding_transcript
8505866 8511708 20637 26479 + gene CG6765 coding_transcript
8506969 8507991 21740 22762 - gene CG6683 coding_transcript
8511988 8513410 26759 28181 + gene CG6776 coding_transcript
8513652 8514596 28423 29367 + gene se coding_transcript
8514539 8516600 29310 31371 - gene CG6673 coding_transcript
8516842 8517961 31613 32732 - gene CG6662 coding_transcript
8518344 8527084 33115 42917 + gene foi coding_transcript
8518344 8527084 33115 42917 + mrna FBtr0076624 coding_transcript
8518344 8518804 33115 33575 + exon coding_transcript
8518344 8518804 33115 33575 + five_prime_utr coding_transcript
8518805 8523659 33576 38430 + intron coding_transcript
8523660 8524249 38431 39020 + exon coding_transcript
8523660 8523820 38431 38591 + five_prime_utr coding_transcript
8523821 8524249 38592 39020 + cds coding_transcript
8524250 8524316 39021 39087 + intron coding_transcript
8524317 8524665 39088 39436 + exon coding_transcript
8524317 8524665 39088 39436 + cds coding_transcript
8524666 8524734 39437 39505 + intron coding_transcript
8524735 8524904 39506 39675 + exon coding_transcript
8524735 8524904 39506 39675 + cds coding_transcript
8524905 8524966 39676 39737 + intron coding_transcript
8524967 8525974 39738 40745 + exon coding_transcript
8524967 8525974 39738 40745 + cds coding_transcript
8525975 8526040 40746 40811 + intron coding_transcript
8526041 8527084 40812 42917 + exon coding_transcript
8526041 8526205 40812 42038 + cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
1482 1541 40974 41033 + cds 2xTY1 CLC
1548 2264 41040 41756 + cds SGFP CLC
2271 2312 41763 41804 + cds V5 CLC
2313 2336 41805 41828 + cds Precision cut site CLC
2337 2357 41829 41849 + cds TEV CLC
2358 2429 41850 41921 + cds BLRP CLC
3813 3846 41929 41962 + misc_recomb FRT CLC
dmel-5.43-3L
8526206 8527084 42039 42917 + three_prime_utr coding_transcript

Sets

Oligos

Name/Sequence Export
foi[40973]::S000169_fly_pretag_rev
ATACGCTACAAGATTCGCTGCGGTTGGTTACAATTTCACTTATGTTATTActtgtcgtcgtcatccttgtagtca
 fasta Fasta
foi[40973]::S000169_fly_pretag_fwd
TGATGAGCGCGTTCGGCACAGCGGGAGCCGCATCACACCAGCACGCGCACgaagtgcataccaatcaggacccgc
 fasta Fasta