Clone: 3107464668329264 H11

Tagged gene: unc-17
Identifier: WBGene00006756

Clone WRM0623C_C11(pRedFlp-Hgr)(unc-17[28239]::S0001_pR6K_Amp_2xTY1ce_EGFP_FRT_rpsl_neo_FRT_3xFlag)dFRT::unc-119-Nat
Library UBC N2 fosmid library (Don Moreman) in E. coli EPI300
Genome Species: Caenorhabditis elegans, Release: 184

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation good [view]

Genes in pCC1fos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
unc-119-Nat 2761 240 3000 - 1031 3791 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pCC1fos
1 86 1 86 - cds LacZ epicentre
115 140 115 140 - primer_bind CC1rev epicentre
pTag[unc-119-Nat]
1031 3791 240 3000 - gene unc-119-Nat EMBL
3426 3532 499 605 - CDS unc-119 EMBL
2997 3374 657 1034 - CDS unc-119 EMBL
2842 2953 1078 1189 - CDS unc-119 EMBL
2687 2743 1288 1344 - CDS unc-119 EMBL
1604 1676 2355 2427 + promoter gb2 EMBL
1034 1603 2428 2997 + CDS NatR EMBL
pCC1fos
416 1075 3177 3836 - cds Cat epicentre
1294 1641 4055 4402 + cds redF epicentre
2025 2642 4786 5403 + rep_origin oriV epicentre
2642 2696 5403 5457 + rep_origin ori2 epicentre
3036 3791 5797 6552 + cds repE epicentre
4370 5545 7131 8306 + cds parA epicentre
5545 6516 8306 9277 + cds parB epicentre
6589 7106 9350 9867 + repeat_region parC epicentre
7322 7720 10083 10481 + misc_binding cos epicentre
7738 7771 10499 10532 + misc_recomb loxP epicentre
7938 8139 10699 10900 - cds LacZ epicentre
8008 8034 10769 10795 + primer_bind CC1fwd epicentre
8089 8106 10850 10867 + primer_bind T7 epicentre
cele-184-IV
3637075 3637589 11909 12423 - gene ZC416.1 coding_transcript
3633617 3635405 14093 15881 - gene ZC416.2 coding_transcript
3613927 3624692 24806 36615 + gene cha-1 coding_transcript
3618267 3623466 26032 32275 + gene landmark
3618267 3623466 26032 32275 + mrna coding_transcript
3618267 3623466 26032 32275 + gene unc-17 coding_transcript
3622978 3623466 26032 26520 + cds coding_transcript
3622978 3623466 26032 26520 + exon coding_transcript
3622978 3623466 26032 26520 + cds twinscan
3621313 3622977 26521 28185 + intron coding_transcript
3621033 3621312 28186 28465 + cds coding_transcript
3621033 3621312 28186 28465 + exon coding_transcript
3621033 3621312 28186 28465 + cds twinscan
3621033 3621312 28186 28465 + cds genefinder
3621040 3621312 28186 28458 + cds genemarkhmm
3619325 3621032 28466 30173 + intron coding_transcript
3619396 3619495 30003 30102 + cds genemarkhmm
3618495 3619324 30174 32047 + cds coding_transcript
3618495 3619324 30174 32047 + exon coding_transcript
3618495 3619324 30174 32047 + cds genemarkhmm
3618495 3619324 30174 32047 + cds twinscan
3618495 3619324 30174 32047 + cds genefinder
S0001_pR6K_Amp_2xTY1ce_EGFP_FRT_rpsl_neo_FRT_3xFLAG
902 1138 31001 31237 + CDS 2xTY1wEGFP3xflag
902 960 31001 31059 + misc_feature 2xTY1.c.el
968 1834 31067 31933 + misc_feature ce_GFP_with_introns
1139 1189 31238 31288 + intron intron.1
1190 1343 31289 31442 + CDS 2xTY1wEGFP3xflag
1344 1394 31443 31493 + intron intron.2
1395 1558 31494 31657 + CDS 2xTY1wEGFP3xflag
1559 1609 31658 31708 + intron intron.3
1610 1872 31709 31937 + CDS 2xTY1wEGFP3xflag
3215 3248 31938 31971 + misc_recomb FRT
3249 3321 31972 32044 + CDS 2xTY1wEGFP3xflag
3256 3321 31979 32044 + CDS 3xFLAG-noRepeats
cele-184-IV
3618267 3618494 32048 32275 + three_prime_utr coding_transcript
3609212 3613067 37475 41330 + gene ZC416.6 coding_transcript
3606791 3609114 41428 43751 - gene kgb-2 coding_transcript
3603544 3606461 44081 46998 + gene Y37E11B.10 coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
unc-17[28239]::S0001_pR6K_Amp_2xTY1ce_EGFP_FRT_rpsl_neo_FRT_3xFlag_rev
CCATTGCACTTGGTAGAATAAACATATTCAGAGATCCAAATCTACGACTActtgtcgtcgtcatccttgt
 fasta Fasta
unc-17[28239]::S0001_pR6K_Amp_2xTY1ce_EGFP_FRT_rpsl_neo_FRT_3xFlag_fwd
GGCCCCAAGCCGAATTCCCCGCCGGATATGACCCACTGAATCCGCAGTGGgaagtgcataccaatcagga
 fasta Fasta