Clone: 4025885511280456 C02

Tagged gene: elc-2
Identifier: WBGene00001237

Clone WRM063B_B12(pRedFlp-Hgr)(elc-2[20837]::S0001_pR6K_Amp_2xTY1ce_EGFP_FRT_rpsl_neo_FRT_3xFlag)dFRT::unc-119-Nat
Library UBC N2 fosmid library (Don Moreman) in E. coli EPI300
Genome Species: Caenorhabditis elegans, Release: 184

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation good [view]

Genes in pCC1fos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
unc-119-Nat 2761 240 3000 - 1031 3791 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pCC1fos
1 86 1 86 - cds LacZ epicentre
115 140 115 140 - primer_bind CC1rev epicentre
pTag[unc-119-Nat]
1031 3791 240 3000 - gene unc-119-Nat EMBL
3426 3532 499 605 - CDS unc-119 EMBL
2997 3374 657 1034 - CDS unc-119 EMBL
2842 2953 1078 1189 - CDS unc-119 EMBL
2687 2743 1288 1344 - CDS unc-119 EMBL
1604 1676 2355 2427 + promoter gb2 EMBL
1034 1603 2428 2997 + CDS NatR EMBL
pCC1fos
416 1075 3177 3836 - cds Cat epicentre
1294 1641 4055 4402 + cds redF epicentre
2025 2642 4786 5403 + rep_origin oriV epicentre
2642 2696 5403 5457 + rep_origin ori2 epicentre
3036 3791 5797 6552 + cds repE epicentre
4370 5545 7131 8306 + cds parA epicentre
5545 6516 8306 9277 + cds parB epicentre
6589 7106 9350 9867 + repeat_region parC epicentre
7322 7720 10083 10481 + misc_binding cos epicentre
7738 7771 10499 10532 + misc_recomb loxP epicentre
7938 8139 10699 10900 - cds LacZ epicentre
8008 8034 10769 10795 + primer_bind CC1fwd epicentre
8089 8106 10850 10867 + primer_bind T7 epicentre
cele-184-X
1786902 1788400 12551 14049 - gene arg-1 coding_transcript
1779433 1780522 20429 21518 - gene F31A9.4 coding_transcript
1777350 1778141 22810 24645 + mrna coding_transcript
1777350 1778141 22810 24645 + gene elc-2 coding_transcript
1778105 1778141 22810 22846 + cds coding_transcript
1778105 1778141 22810 22846 + exon coding_transcript
1778035 1778104 22847 22916 + intron coding_transcript
1777926 1778034 22917 23025 + cds coding_transcript
1777926 1778034 22917 23025 + exon coding_transcript
1777926 1778034 22917 23025 + cds genefinder
1777926 1778032 22919 23025 + cds genefinder
1777926 1778005 22946 23025 + cds genemarkhmm
1777926 1778005 22946 23025 + cds twinscan
1777873 1777925 23026 23078 + intron coding_transcript
1777721 1777872 23079 23230 + cds coding_transcript
1777721 1777872 23079 23230 + exon coding_transcript
1777721 1777872 23079 23230 + cds genemarkhmm
1777721 1777872 23079 23230 + cds twinscan
1777721 1777872 23079 23230 + cds genefinder
1777721 1777872 23079 23230 + cds genefinder
1777544 1777720 23231 23407 + intron coding_transcript
1777350 1777543 23408 24645 + cds coding_transcript
1777350 1777543 23408 24645 + exon coding_transcript
1777350 1777543 23408 24645 + cds genemarkhmm
1777350 1777543 23408 24645 + cds twinscan
1777350 1777543 23408 24645 + cds genefinder
1777470 1777543 23408 23481 + cds genefinder
S0001_pR6K_Amp_2xTY1ce_EGFP_FRT_rpsl_neo_FRT_3xFLAG
902 1138 23599 23835 + CDS 2xTY1wEGFP3xflag
902 960 23599 23657 + misc_feature 2xTY1.c.el
968 1834 23665 24531 + misc_feature ce_GFP_with_introns
1139 1189 23836 23886 + intron intron.1
1190 1343 23887 24040 + CDS 2xTY1wEGFP3xflag
1344 1394 24041 24091 + intron intron.2
1395 1558 24092 24255 + CDS 2xTY1wEGFP3xflag
1559 1609 24256 24306 + intron intron.3
1610 1872 24307 24535 + CDS 2xTY1wEGFP3xflag
3215 3248 24536 24569 + misc_recomb FRT
3249 3321 24570 24642 + CDS 2xTY1wEGFP3xflag
3256 3321 24577 24642 + CDS 3xFLAG-noRepeats

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
elc-2[20837]::S0001_pR6K_Amp_2xTY1ce_EGFP_FRT_rpsl_neo_FRT_3xFlag_fwd
CTCCGGATATTGCGATGGATCTTCTAGCGGCCGCTAATGAGCTGGAATGCgaagtgcataccaatcagga
 fasta Fasta
elc-2[20837]::S0001_pR6K_Amp_2xTY1ce_EGFP_FRT_rpsl_neo_FRT_3xFlag_rev
GAAAATTGCAAGTTTATTTCAAAAATCTCCACGATTTCAAAAAAAACTCActtgtcgtcgtcatccttgt
 fasta Fasta